Fitness data for PP_3556 in Pseudomonas putida KT2440

conserved membrane protein of unknown function
SEED: Histidine permease YuiF

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.7 -1.9 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 -0.5 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.4 -1.7 compare
supernatant Supernatant; Paenibacillus sp. UNCCL52 spent media 0.5x -0.4 -2.7 compare
mixed community control Putida_ML5X alone -0.4 -2.8 compare
temperature shift Temperature shift 10_to_30 +0.4 +2.5 compare
carbon source D-Glucose (C) with 20AA_mix_minus_Met +0.4 +2.4 compare
phage moi 100 Time6-phageFRS +0.4 +2.6 compare
carbon source D-Glucose (C) with 20AA_mix_minus_Glu +0.5 +3.3 compare
carbon source carbon source Glycerol 108.6 mM +0.5 +2.1 compare
pH Growth at pH6 and (C) Trisodium citrate +0.5 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +1.6 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM +0.5 +2.2 compare
pH pH 6 +0.5 +1.8 compare
nitrogen source nitrite (N) +0.5 +3.0 compare
pH Growth at pH6 and (C) Trisodium citrate +0.5 +1.9 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM +0.5 +1.9 compare
phage P. putida Sci small MOI 0.1 +0.5 +1.6 compare
carbon source Delta-Nonalactone (C) +0.5 +3.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.3 compare