Fitness data for PP_3551 in Pseudomonas putida KT2440

DNA-binding response regulator, LuxR family
SEED: DNA-binding response regulator, LuxR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.9)


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group condition fitness t score  
carbon source butyrate (C) -3.6 -2.2 compare
pH D-Glucose (C) pH 6 -2.6 -1.5 compare
carbon source Butanol (C) -2.4 -3.5 compare
carbon source Butanol (C) -2.4 -2.0 compare
stress MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL -2.4 -1.6 compare
carbon source 2-Methylbutanoic (C) -2.3 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -2.3 -1.9 compare
carbon source butyrate (C) -2.2 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -2.2 -1.4 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -2.1 -1.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -2.1 -1.8 compare
r2a control with 0.2% methanol R2A control with 0.2% methanol -2.0 -1.5 compare
carbon source 1-Pentanol (C) +1.9 +4.2 compare
carbon source Delta-Nonalactone (C) +2.0 +7.1 compare
carbon source D-Glucose (C) +2.0 +3.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +2.1 +4.6 compare
carbon source Valeric (C) +2.1 +1.1 compare
carbon source Valeric (C) +2.5 +7.0 compare
carbon source Valeric (C) +2.9 +8.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +3.3 +1.7 compare