Fitness data for PP_3538 in Pseudomonas putida KT2440

transcriptional regulator
SEED: Transcriptional regulator PobR, AraC family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source p-Coumaric (C) -4.7 -12.7 compare
carbon source p-Coumaric (C) -4.6 -14.3 compare
carbon source 4-Hydroxybenzoic Acid (C) -3.8 -14.3 compare
carbon source p-Coumaric (C) -3.2 -12.4 compare
carbon source p-Coumaric (C) -3.0 -13.2 compare
carbon source 4-Hydroxybenzoic Acid (C) -3.0 -11.7 compare
carbon source p-Coumaric (C) -1.9 -9.8 compare
carbon source 4-Hydroxybenzoic Acid (C) -1.1 -6.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.8 -3.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.7 -2.8 compare
carbon source BC Lignin Sorghum 10 vol% (C) -0.6 -3.3 compare
carbon source Crotonic (C) -0.5 -2.5 compare
nitrogen source Ammonium chloride (N) -0.5 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.8 compare
carbon source Lignin Monomers (C) -0.5 -2.8 compare
carbon source L-Phenylalanine 5 mM (C) -0.4 -2.7 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.4 compare
carbon source Hexanoic (C) +0.4 +2.7 compare
pH pH 6 +0.5 +2.3 compare
carbon source butyrate (C) +0.5 +2.7 compare