Fitness data for PP_3529 in Pseudomonas putida KT2440

dimethyl-sulfide monooxygenase
SEED: Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source ferulate (C); with MOPS -0.7 -2.8 compare
phage PUT 8 MOI 1 -0.5 -2.0 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.5 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.4 -1.9 compare
pH Growth at pH6 and (C) D-Glucose -0.4 -1.6 compare
carbon source Valeric (C) -0.4 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.4 -1.6 compare
pH Growth at pH9 and (C) Trisodium citrate -0.3 -1.9 compare
temperature Growth at 25C; with MOPS -0.3 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.3 -2.3 compare
phage PUT8 MOI 10 -0.3 -2.0 compare
pH Growth at pH6 and (C) D-Glucose -0.3 -1.4 compare
carbon source 2-Keto-D-gluconic hemicalcium salt (C) +0.3 +2.2 compare
nitrogen source D-2-Aminobutyric (N) +0.4 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4 +1.9 compare
temperature shift Temperature shift 10_to_30; with MOPS +0.4 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.4 compare
pH Valerolactone (C) pH 6.5 +0.4 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.9 compare
phage P. putida PUT 7 MOI 1 +0.4 +2.2 compare