Fitness data for PP_3525 in Pseudomonas putida KT2440

conserved exported protein of unknown function
SEED: FAD/FMN-containing dehydrogenases

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
pH Growth at pH6 and (C) D-Glucose -1.4 -2.7 compare
carbon source carbon source 3-O-methyl-glucose 50 mM -1.2 -2.9 compare
carbon source carbon source 4-vinylphenol 0.01 mM -1.2 -3.3 compare
carbon source D-Glucose (C); with MOPS -1.2 -2.6 compare
temperature Growth at 30C; with MOPS -1.1 -3.1 compare
pH Growth at pH7 and (C) D-Glucose -0.9 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.9 -2.9 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM -0.9 -2.9 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) -0.9 -2.8 compare
temperature shift Temperature shift 10_to_34; with MOPS -0.8 -3.6 compare
pH pH 5 -0.8 -2.7 compare
nitrogen source NAG (N); with MOPS -0.8 -1.3 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.7 -3.1 compare
stress MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL -0.7 -2.4 compare
temperature Growth at 25C -0.7 -2.3 compare
carbon source carbon source Glycerol 108.6 mM -0.7 -2.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -2.6 compare
reactor 48hr timepoint of 1L M9/1% dextrose DISCONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat set to 10% DO. +0.6 +2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.7 +2.4 compare
nitrogen source 2,6-diaminopimelic (N) +1.1 +3.7 compare