Fitness data for PP_3517 in Pseudomonas putida KT2440

conserved exported protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source Tween 20 (C) -0.8 -2.6 compare
carbon source Tween 20 (C) -0.8 -3.1 compare
pH Growth at pH9 and (C) Trisodium citrate -0.6 -2.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.5 -2.4 compare
carbon source carbon source 3-O-methyl-glucose 10 mM -0.5 -1.8 compare
pH pH 8 -0.5 -1.5 compare
carbon source D-Glucose (C) -0.5 -1.9 compare
stress R2A with Fusaric 120 ug/mL -0.4 -1.9 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.4 -2.2 compare
carbon source D-Glucose (C) -0.4 -1.8 compare
carbon source ferulate (C); with MOPS -0.4 -1.3 compare
temperature Growth at 30C +0.4 +2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.4 +2.1 compare
nitrogen source nitrogen source Ammonium chloride 20mM +0.4 +2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.5 +1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.5 +2.4 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +2.4 compare
nitrogen source nitrogen source nitrite 0.5mM +0.5 +2.4 compare
phage P. putida Sci small MOI 0.1 +0.6 +2.1 compare
nitrogen source nitrogen source nitrite 0.5mM +0.6 +2.8 compare