Fitness data for PP_3513 in Pseudomonas putida KT2440

Transcriptional regulator, LysR family
SEED: LysR-family transcriptional regulator STM3020

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -3.0 compare
nitrogen source NAG (N); with MOPS -0.4 -2.2 compare
pH pH 6 -0.4 -1.9 compare
pH Growth at pH6 and (C) D-Glucose -0.4 -1.7 compare
mixed community Putida_ML5X with Paraburkholderia sabiae T6SS mutant -0.4 -2.1 compare
phage P. putida South MOI 10 -0.4 -2.2 compare
stress Growth with Chloride 500 mM; with MOPS -0.4 -1.9 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM -0.4 -2.1 compare
micoeukaryotes Tetrahymena sp., Mixed culture-1 -0.3 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.3 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.4 compare
nitrogen source Urea (N) -0.3 -1.8 compare
nitrogen source D-2-Aminobutyric (N) +0.3 +1.3 compare
stress MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL +0.4 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +1.3 compare
phage P. putida Sci small MOI 0.1 +0.4 +1.8 compare
phage P. putida Sci Big MOI 0.1 +0.4 +2.0 compare
phage P. putida Missley MOI 0.1 +0.5 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +3.2 compare