Fitness data for PP_3478 in Pseudomonas putida KT2440

putative Secretion protein
SEED: Predicted secretion system X protein GspD-like
KEGG: general secretion pathway protein D

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source Delta-Nonalactone (C) -1.0 -2.3 compare
nitrogen source nitrate (N) -0.8 -2.2 compare
phage P. putida PUT 7 MOI 1 -0.8 -1.6 compare
phage P. put South MOI 10 -0.7 -1.6 compare
nitrogen source Hippuric (N) -0.7 -2.3 compare
temperature Growth at 25C -0.6 -1.6 compare
temperature shift Temperature shift 10_to_30 -0.6 -2.7 compare
stress R2A with Fusaric 480 ug/mL -0.6 -1.7 compare
carbon source Decanoic (C) -0.6 -1.7 compare
nitrogen source nitrate (N) -0.6 -1.0 compare
r2a control with 0.2% methanol R2A control with 0.2% methanol -0.6 -1.6 compare
pH pH 5 +0.6 +2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.6 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.7 compare
nitrogen source NAG (N); with MOPS +0.6 +1.6 compare
pH pH 7 +0.7 +2.2 compare
carbon source ferulate (C); with MOPS +0.7 +1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.7 +3.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.8 +3.3 compare
phage P. putida Sci Big MOI 0.1 +0.9 +2.4 compare