Fitness data for PP_3477 in Pseudomonas putida KT2440

Putative secretion type II protein related to protein G
SEED: Predicted secretion system X protein GspG-like
KEGG: general secretion pathway protein G

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
carbon source carbon source 3-O-methyl-glucose 50 mM -1.4 -2.8 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.3 -3.8 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.1 -3.5 compare
pH Growth at pH9 and (C) Trisodium citrate -1.1 -3.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.0 -1.9 compare
carbon source 2,3-Butanediol (C) -1.0 -1.7 compare
temperature Growth at 25C -1.0 -2.1 compare
pH Growth at pH6 and (C) D-Glucose -0.9 -1.8 compare
nitrogen source nitrite (N) -0.9 -3.5 compare
nitrogen source Urea (N) -0.8 -2.6 compare
carbon source Delta-Decalactone (C) -0.8 -1.4 compare
temperature shift Temperature shift 10_to_21 -0.7 -3.0 compare
pH Growth at pH9 and (C) Trisodium citrate -0.7 -1.8 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.7 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.8 +2.0 compare
nitrogen source nitrogen source Ammonium chloride 20mM +0.8 +2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.8 +3.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.9 +2.2 compare
nitrogen source nitrogen source nitrate 20mM +0.9 +2.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.9 +2.9 compare