Fitness data for PP_3431 in Pseudomonas putida KT2440

ThiJ/PfpI family protein
SEED: ThiJ/PfpI family protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.7 -3.5 compare
nitrogen source 2,6-diaminopimelic (N) -0.5 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.5 -2.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.5 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.5 -2.1 compare
phage P. putida Sci Big MOI 0.1 -0.5 -1.8 compare
carbon source L-Proline (C) -0.5 -2.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.4 -1.9 compare
reactor 40hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 2.15g/hr dextrose, set to 30% DO. -0.4 -2.4 compare
nitrogen source Urea (N) -0.4 -1.5 compare
carbon source carbon source 4-vinylphenol 0.1 mM -0.4 -1.8 compare
carbon source Tween 20 (C) -0.4 -1.4 compare
carbon source L-Leucine (C) -0.4 -2.1 compare
pH Growth at pH6 and (C) D-Glucose +0.4 +2.0 compare
nitrogen source D-2-Aminobutyric (N) +0.4 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.5 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 +0.5 +1.5 compare
stress Growth with Chloride 500 mM; with MOPS +0.5 +2.3 compare
nitrogen source 2,6-diaminopimelic (N) +0.5 +2.2 compare
pH Growth at pH8 and (C) D-Glucose +0.5 +2.1 compare