Fitness data for PP_3429 in Pseudomonas putida KT2440

Response regulator/sensor histidine kinase
SEED: Sensory box sensor histidine kinase/response regulator (EC 2.7.3.-)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.6 -2.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.4 -4.1 compare
stress R2A with Fusaric 240 ug/mL -0.8 -3.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.8 -2.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7 -3.5 compare
pH Growth at pH6 and (C) D-Glucose -0.7 -3.8 compare
carbon source Valerolactone (C) -0.7 -2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.6 -3.8 compare
r2a control R2A control -0.6 -2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.6 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.5 -3.0 compare
phage moi 100 Time6-phageFRS -0.5 -2.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.5 -2.3 compare
r2a control with 0.2% methanol R2A control with 0.2% methanol -0.5 -2.3 compare
stress R2A with Fusaric 120 ug/mL -0.5 -2.9 compare
nitrogen source nitrogen source nitrate 5mM +0.5 +2.0 compare
phage PUT 8 MOI 1 +0.6 +2.7 compare
phage P. putida Missley MOI 0.1 +0.6 +1.9 compare
nitrogen source D-2-Aminobutyric (N) +0.6 +1.5 compare
nitrogen source NAG (N); with MOPS +0.8 +2.6 compare