Fitness data for PP_3427 in Pseudomonas putida KT2440

Multidrug efflux RND outer membrane protein OprN
SEED: Outer membrane protein OprN

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -1.9 -3.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -1.2 -2.9 compare
micoeukaryotes C.elegans, mixed culture-1 -1.2 -2.9 compare
micoeukaryotes Dictyostellum sp.mixed culture-2 -1.2 -2.9 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 -1.1 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.1 -2.5 compare
carbon source ferulate (C); with MOPS -1.1 -2.6 compare
micoeukaryotes Dictyostellum sp.mixed culture-1 -1.1 -2.9 compare
micoeukaryotes C.elegans, mixed culture-2 -1.0 -2.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.0 -4.2 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 -1.0 -2.1 compare
micoeukaryotes Tetrahymena sp., Mixed culture-1 -1.0 -2.9 compare
nitrogen source NAG (N); with MOPS -1.0 -1.7 compare
nitrogen source Ammonium chloride and TNT (N) -1.0 -4.1 compare
micoeukaryotes Acanthamoeba sp., muxed culture-1 -0.9 -3.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.9 -2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.9 -3.2 compare
carbon source L-Phenylalanine 5 mM (C) -0.9 -2.8 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM +1.0 +4.4 compare
no stress control Growth with no stress +1.0 +3.5 compare