Fitness data for PP_3389 in Pseudomonas putida KT2440

conserved membrane protein of unknown function
SEED: FIG00954071: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -2.1 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.5 -2.3 compare
temperature shift Temperature shift 30_to_25 -0.4 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.4 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.4 -1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.3 -1.9 compare
pH pH 5 -0.3 -1.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.3 -1.6 compare
carbon source carbon source D-Glucose 55.5 mM -0.3 -1.3 compare
stress MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL +0.3 +2.3 compare
nitrogen source nitrogen source nitrate 20mM +0.4 +1.9 compare
phage PUT8 MOI 10 +0.4 +2.4 compare
carbon source 3-Hydroxydecanoic (C) +0.4 +2.4 compare
carbon source ferulate (C); with MOPS +0.5 +1.9 compare
phage PUT 8 MOI 1 +0.5 +1.7 compare
phage PUT8 MOI 10 +0.5 +2.7 compare
phage P. putida Missley MOI 0.1 +0.6 +1.9 compare
phage P. putida PUT 7 MOI 1 +0.6 +2.5 compare
nitrogen source nitrogen source nitrite 1mM +0.6 +3.3 compare