Fitness data for PP_3385 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: Outer membrane protein ImpK/VasF, OmpA/MotB domain
KEGG: type VI secretion system protein ImpK

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
pH pH 9 -0.8 -2.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -2.5 compare
pH Growth at pH6 and (C) Trisodium citrate -0.6 -2.2 compare
carbon source Valerolactone (C) -0.6 -2.0 compare
carbon source carbon source 3-O-methyl-glucose 10 mM -0.6 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.5 -1.5 compare
carbon source carbon source D-Glucose 55.5 mM -0.5 -1.5 compare
no stress control Growth with no stress -0.5 -1.8 compare
pH pH 4 -0.5 -1.5 compare
carbon source D-Glucose (C) -0.5 -1.4 compare
temperature shift Temperature shift 30_to_4 -0.5 -2.5 compare
nitrogen source Urea (N); with MOPS -0.5 -1.7 compare
pH pH 6 -0.4 -1.6 compare
carbon source Nonanoic (C) -0.4 -1.9 compare
pH Growth at pH7 and (C) Trisodium citrate -0.4 -1.2 compare
pH pH 5 -0.4 -2.0 compare
phage P. putida Sci Big MOI 0.1 +0.4 +1.8 compare
carbon source acetate (C) +0.5 +1.7 compare
nitrogen source nitrogen source nitrate 20mM +0.5 +2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.5 +2.9 compare