Fitness data for PP_3375 in Pseudomonas putida KT2440

endonuclease I
SEED: Endonuclease I precursor (EC 3.1.21.1)
KEGG: deoxyribonuclease I

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
phage P. putida Sci small MOI 0.1 -1.2 -3.1 compare
stress TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 1250 uM; timepoint 1 -0.9 -5.2 compare
nitrogen source D-2-Aminobutyric (N) -0.8 -2.2 compare
stress TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 1250 uM; timepoint 1 -0.7 -5.1 compare
nitrogen source 2,6-diaminopimelic (N) -0.6 -2.4 compare
pH Growth at pH6 and (C) Trisodium citrate -0.6 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -2.1 compare
temperature shift Temperature shift 30_to_21 -0.6 -2.8 compare
carbon source acetate (C) -0.6 -2.2 compare
temperature shift Temperature shift 30_to_21 -0.6 -2.9 compare
stress TSB 0.5x with 6-methoxy-2(3H)-benzoxazolone 2500 uM; timepoint 1 -0.6 -4.0 compare
carbon source carbon source Bisabolol 45 mM -0.5 -2.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.4 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X +0.5 +3.6 compare
carbon source Myristic (C) +0.5 +2.0 compare
pH Growth at pH7 and (C) Trisodium citrate +0.5 +2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.6 +2.6 compare
stress Growth with Chloride 500 mM; with MOPS +0.6 +2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.6 +1.0 compare
nitrogen source nitrogen source nitrate 5mM +0.7 +2.9 compare