Fitness data for PP_3363 in Pseudomonas putida KT2440

putative thymidylate kinase
SEED: Thymidylate kinase (EC 2.7.4.9)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
nitrogen source nitrogen source nitrite 1mM -1.1 -1.1 compare
temperature shift Temperature shift 30_to_25 -1.1 -2.3 compare
carbon source D-Glucose (C) -1.1 -2.2 compare
pH Growth at pH7 and (C) D-Glucose -1.1 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.0 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.0 -1.3 compare
no stress control Growth with no stress -0.9 -1.9 compare
temperature shift Temperature shift 30_to_21; with MOPS -0.9 -1.8 compare
temperature shift Temperature shift 30_to_4; with MOPS -0.8 -1.9 compare
pH Growth at pH6 and (C) D-Glucose -0.8 -1.3 compare
temperature shift Temperature shift 10_to_25 -0.8 -3.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.8 -2.3 compare
carbon source 3-Hydroxydecanoic (C) -0.8 -1.7 compare
stress R2A with Fusaric 240 ug/mL +0.8 +2.2 compare
pH pH 4 +0.8 +2.5 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +1.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.9 +1.4 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.9 +1.5 compare
nitrogen source NAG (N); with MOPS +0.9 +1.8 compare
temperature shift Temperature shift 30_to_25 +1.1 +4.5 compare