Fitness data for PP_3354 in Pseudomonas putida KT2440

putative Acyl-CoA dehydrogenase, ferrulic acid biotransformation protein
SEED: Acyl-CoA dehydrogenase (EC 1.3.8.7)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
pH Growth at pH7 and (C) Trisodium citrate -0.6 -2.5 compare
phage P. putida PUT 7 MOI 1 -0.5 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.4 -3.0 compare
temperature shift Temperature shift 10_to_30; with MOPS -0.4 -2.6 compare
carbon source acetate (C) -0.4 -1.7 compare
carbon source Valerolactone (C) -0.4 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.4 -2.1 compare
carbon source Nonanoic (C) -0.4 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.4 -1.6 compare
carbon source D-Glucose (C); with MOPS -0.4 -1.4 compare
nitrogen source nitrogen source nitrate 5mM -0.4 -2.0 compare
temperature Growth at 25C -0.4 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.3 -1.5 compare
temperature shift Temperature shift 10_to_21; with MOPS -0.3 -2.0 compare
phage P. putida South MOI 10 -0.3 -1.6 compare
nitrogen source Ammonium chloride (N) +0.4 +2.3 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +1.7 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +1.3 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +1.8 compare