Fitness data for PP_3352 in Pseudomonas putida KT2440

Arylsulfatase
SEED: Choline-sulfatase (EC 3.1.6.6)
KEGG: arylsulfatase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
phage P. putida Sci Big MOI 0.1 -0.8 -3.1 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO. -0.6 -3.7 compare
nitrogen source 2,6-diaminopimelic (N) -0.6 -2.1 compare
r2a control with 0.2% methanol R2A control with 0.2% methanol -0.5 -2.6 compare
pH pH 9 -0.4 -1.5 compare
phage P. putida Sci small MOI 0.1 -0.4 -1.1 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.4 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.4 -1.6 compare
nitrogen source nitrogen source nitrite 0.5mM -0.3 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.3 -1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +1.6 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) +0.3 +1.8 compare
carbon source Tween 20 (C) +0.4 +1.9 compare
pH Growth at pH7 and (C) Trisodium citrate +0.4 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.4 +1.8 compare
temperature Growth at 25C +0.5 +2.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.5 +2.1 compare
carbon source ferulate (C); with MOPS +0.5 +2.1 compare