Fitness data for PP_3343 in Pseudomonas putida KT2440

nickel ABC transporter permease subunit
SEED: Nickel transport system permease protein NikB (TC 3.A.1.5.3)
KEGG: peptide/nickel transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
phage P. putida PUT 7 MOI 1 -1.4 -3.4 compare
phage P. putida Missley MOI 0.1 -1.2 -2.1 compare
carbon source Valerolactone (C) -0.8 -2.9 compare
carbon source Trisodium citrate (C) -0.8 -1.9 compare
phage P. putida Sci small MOI 0.1 -0.7 -1.4 compare
nitrogen source Propandiamine (N) -0.6 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.5 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.4 -2.2 compare
carbon source D-Glucose (C); with MOPS -0.4 -1.2 compare
temperature Growth at 30C; with MOPS +0.4 +1.7 compare
r2a control with 0.2% methanol R2A control with 0.2% methanol +0.4 +1.7 compare
temperature Growth at 25C +0.5 +1.4 compare
pH Growth at pH6 and (C) D-Glucose +0.5 +1.7 compare
stress R2A with Fusaric 120 ug/mL +0.5 +2.2 compare
pH Growth at pH7 and (C) D-Glucose +0.5 +1.8 compare
micoeukaryotes C.elegans, mixed culture-2 +0.5 +2.0 compare
pH pH 6 +0.5 +1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.9 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.7 +3.5 compare