Fitness data for PP_3342 in Pseudomonas putida KT2440

nickel ABC transporter periplasmic binding protein
SEED: Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3)
KEGG: peptide/nickel transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
phage P. putida Missley MOI 0.1 -1.0 -2.4 compare
phage P. putida Sci Big MOI 0.1 -0.7 -1.7 compare
nitrogen source nitrogen source nitrate 20mM -0.7 -3.1 compare
temperature shift Temperature shift 30_to_10 -0.5 -3.4 compare
stress R2A with Fusaric 240 ug/mL -0.5 -2.3 compare
pH Growth at pH8 and (C) Trisodium citrate -0.5 -2.4 compare
temperature shift Temperature shift 10_to_34; with MOPS -0.4 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.1 compare
stress Growth with Chloride 500 mM -0.4 -2.2 compare
carbon source 4-Methyl-2-oxopentanoic (C) +0.4 +2.4 compare
carbon source ferulate (C); with MOPS +0.4 +1.7 compare
temperature shift Temperature shift 30_to_25; with MOPS +0.4 +2.1 compare
carbon source carbon source 3-O-methyl-glucose 50 mM +0.5 +1.6 compare
carbon source carbon source 4-vinylphenol 0.01 mM +0.5 +1.9 compare
pH pH 6 +0.5 +1.8 compare
pH pH 8 +0.5 +1.6 compare
pH pH 4 +0.5 +2.1 compare
carbon source carbon source 4-vinylphenol 0.1 mM +0.5 +2.4 compare
pH pH 9 +0.6 +1.9 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM +0.6 +2.2 compare