Fitness data for PP_3337 in Pseudomonas putida KT2440

conserved membrane protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
stress R2A with Polymyxin B sulfate 0.002 mg/ml -1.3 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.2 -3.1 compare
carbon source ferulate (C); with MOPS -1.0 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.9 -2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.8 -1.8 compare
carbon source Ethyl decanoate and D-Glucose (C)s -0.8 -2.5 compare
nitrogen source nitrate (N) -0.8 -1.8 compare
r2a control with 0.2% methanol R2A control with 0.2% methanol -0.7 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 -1.6 compare
stress R2A with Fusaric 480 ug/mL -0.6 -1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X +0.6 +2.8 compare
stress MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL +0.7 +3.4 compare
carbon source carbon source 4-vinylphenol 0.01 mM +0.7 +1.6 compare
pH Growth at pH9 and (C) Trisodium citrate +0.7 +2.7 compare
pH Growth at pH7 and (C) D-Glucose +0.7 +2.7 compare
carbon source carbon source 4-vinylphenol 0.1 mM +0.8 +2.3 compare
carbon source carbon source 3-O-methyl-glucose 10 mM +0.8 +2.5 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.0 +1.5 compare
carbon source carbon source D-Glucose 55.5 mM +1.0 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.1 +1.8 compare