Fitness data for PP_3320 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


Add gene:

Or see all 989 experiments or choose conditions

group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -1.8 -2.0 compare
nitrogen source D-2-Aminobutyric (N) -1.8 -1.9 compare
phage PUT 8 MOI 1 -1.6 -1.6 compare
pH Growth at pH6 and (C) D-Glucose -1.3 -1.3 compare
carbon source D-Glucose (C); with MOPS -1.2 -1.6 compare
phage P. putida PUT10 MOI 10 -1.1 -2.4 compare
carbon source DL-3-Hydroxybutyric (C) -1.1 -2.2 compare
carbon source ferulate (C); with MOPS -1.1 -1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.0 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.0 -1.5 compare
pH Growth at pH8 and (C) D-Glucose -1.0 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.0 -2.5 compare
stress R2A with Fusaric 120 ug/mL -1.0 -2.2 compare
reactor 40hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 2.15g/hr dextrose, set to 30% DO. +1.0 +2.8 compare
pH pH 8 +1.0 +2.2 compare
pH pH 6 +1.1 +1.5 compare
carbon source carbon source 3-O-methyl-glucose 50 mM +1.1 +1.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +1.1 +2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.2 +3.1 compare
carbon source Valerolactone (C) +1.3 +4.3 compare