Fitness data for PP_3316 in Pseudomonas putida KT2440

putative Chaperone-associated ATPase
SEED: ATP-dependent Clp protease ATP-binding subunit ClpA
KEGG: ATP-dependent Clp protease ATP-binding subunit ClpC

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.5 -2.4 compare
phage P. putida Sci Big MOI 0.1 -0.5 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.9 compare
carbon source D-Glucose (C) -0.5 -2.4 compare
carbon source ferulate (C); with MOPS -0.4 -1.7 compare
pH Growth at pH6 and (C) D-Glucose -0.4 -1.5 compare
phage P. putida Sci small MOI 0.1 -0.4 -1.5 compare
nitrogen source NAG (N); with MOPS -0.4 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -1.9 compare
nitrogen source 2,6-diaminopimelic (N) -0.4 -1.5 compare
pH Growth at pH6 and (C) Trisodium citrate -0.4 -2.0 compare
pH Growth at pH9 and (C) Trisodium citrate -0.4 -1.7 compare
carbon source 3-Methyl-2-Oxobutanoic Acid (C) -0.3 -2.4 compare
carbon source butyrate (C) -0.3 -1.8 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.3 -1.9 compare
temperature shift Temperature shift 10_to_25; with MOPS -0.3 -1.9 compare
pH D-Glucose (C) pH 6 -0.3 -1.8 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 +1.7 compare
carbon source Lauric (C) +0.3 +2.2 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +1.7 compare