Fitness data for PP_3301 in Pseudomonas putida KT2440

RND efflux membrane fusion protein
SEED: Probable Co/Zn/Cd efflux system membrane fusion protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.9 -3.1 compare
pH Growth at pH9 and (C) Trisodium citrate -0.7 -2.2 compare
nitrogen source NAG (N); with MOPS -0.6 -1.7 compare
pH D-Glucose (C) pH 6.5 -0.6 -2.4 compare
nitrogen source Ammonium chloride (N) -0.6 -1.8 compare
pH Growth at pH6 and (C) Trisodium citrate -0.6 -2.0 compare
carbon source 1,3-Butandiol (C) -0.6 -1.6 compare
stress MOPS minimal media_Glucose20mM with Chloride 200 mM -0.5 -2.6 compare
nitrogen source 2,6-diaminopimelic (N) -0.5 -1.6 compare
pH pH 6 -0.5 -2.1 compare
stress 3-methyl-1-butanol 0.4 vol% -0.5 -2.8 compare
phage P. putida South MOI 10 +0.5 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 +2.6 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml +0.5 +2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.6 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.6 +2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.6 +2.1 compare
carbon source ferulate (C); with MOPS +0.6 +2.3 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.6 +2.5 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 +1.4 compare