Fitness data for PP_3296 in Pseudomonas putida KT2440

putative transporter
SEED: YeeE/YedE family protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source carbon source 3-O-methyl-glucose 10 mM -0.7 -2.4 compare
carbon source carbon source 3-O-methyl-glucose 50 mM -0.7 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.6 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.5 -1.7 compare
carbon source L-Leucine (C) -0.5 -1.9 compare
nitrogen source nitrogen source nitrite 0.5mM -0.5 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.5 -1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.4 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X +0.4 +1.9 compare
carbon source D-Glucose (C); with MOPS +0.4 +1.5 compare
nitrogen source nitrogen source nitrite 0.5mM +0.4 +2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.4 +2.1 compare
pH pH 5 +0.5 +2.0 compare
carbon source ferulate (C); with MOPS +0.6 +2.3 compare
stress Growth with Chloride 200 mM; with MOPS +0.6 +2.8 compare
phage PUT8 MOI 10 +0.7 +3.4 compare
phage PUT8 MOI 0.1 +0.8 +3.5 compare