Fitness data for PP_3293 in Pseudomonas putida KT2440

conserved membrane protein of unknown function
SEED: FIG00957123: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
phage P. putida Sci Big MOI 0.1 -0.9 -2.2 compare
phage P. putida Sci small MOI 0.1 -0.8 -1.9 compare
nitrogen source 2,6-diaminopimelic (N) -0.7 -2.6 compare
phage P. putida Missley MOI 0.1 -0.7 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.6 -1.6 compare
nitrogen source Ammonium chloride (N) -0.5 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.3 compare
phage P. putida Sci small MOI 0.1 +0.5 +1.6 compare
carbon source 4-Aminobutyric 10 mM (C) +0.5 +2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.5 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +2.3 compare
carbon source Protocatechuic Acid (C) +0.5 +3.0 compare
nitrogen source Propiolactam (N) +0.5 +2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.5 +1.9 compare
carbon source Delta-Decalactone (C) +0.5 +1.9 compare
pH pH 9 +0.5 +1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.6 +1.7 compare
nitrogen source NAG (N); with MOPS +0.6 +1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.9 compare