Fitness data for PP_3292 in Pseudomonas putida KT2440

conserved membrane protein of unknown function
SEED: FIG00955519: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


Add gene:

Or see all 989 experiments or choose conditions

group condition fitness t score  
nitrogen source 2,6-diaminopimelic (N) -1.6 -2.4 compare
reactor 24hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO. -1.1 -3.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.0 -3.6 compare
carbon source Tween 20 (C) -1.0 -2.6 compare
pH Valerolactone (C) pH 6.5 -0.9 -2.5 compare
carbon source 1,4-Butanediol (C) -0.7 -3.5 compare
nitrogen source no extra (N); with MOPS -0.7 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.6 -1.1 compare
carbon source Tween 20 (C) -0.6 -2.2 compare
stress MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL -0.6 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.5 -1.8 compare
carbon source D-Glucose (C); with MOPS -0.5 -2.0 compare
carbon source carbon source 2-Deoxy-D-glucose 10 mM -0.5 -1.7 compare
nitrogen source nitrogen source nitrate 5mM +0.5 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.6 +2.4 compare
nitrogen source 2,6-diaminopimelic (N) +0.6 +2.2 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.9 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +1.3 +2.6 compare