Fitness data for PP_3274 in Pseudomonas putida KT2440

ring 1,2-phenylacetyl-CoA epoxidase, reductase subunit
SEED: Phenylacetate-CoA oxygenase/reductase, PaaK subunit
KEGG: phenylacetic acid degradation NADH oxidoreductase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source Phenylacetic (C) -6.0 -11.3 compare
carbon source Phenylacetic (C) -4.2 -11.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7 -3.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.7 -2.0 compare
phage P. putida Sci small MOI 0.1 -0.7 -1.6 compare
carbon source Myristic (C) -0.6 -2.0 compare
carbon source DL-3-Hydroxyisobutyric (C) -0.6 -3.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.5 -2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -1.9 compare
carbon source DL-3-Hydroxybutyric (C) -0.5 -2.3 compare
carbon source 5-Hydroxydodecanoate (C) -0.5 -2.4 compare
carbon source DL-3-Hydroxybutyric (C) -0.5 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.5 -2.6 compare
carbon source ferulate (C); with MOPS +0.5 +1.8 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM +0.5 +2.1 compare
pH Growth at pH9 and (C) Trisodium citrate +0.5 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.9 compare
pH pH 9 +0.5 +2.0 compare
carbon source D-Glucose (C); with MOPS +0.5 +2.0 compare
nitrogen source NAG (N); with MOPS +0.6 +2.2 compare