Fitness data for PP_3271 in Pseudomonas putida KT2440

phenylacetic acid-specific porin
SEED: Phenylacetic acid-specific porin PaaM

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source Phenylacetic (C) -2.1 -4.4 compare
carbon source Phenylacetic (C) -1.8 -5.4 compare
phage P. putida Sci small MOI 0.1 -0.9 -2.6 compare
phage P. putida Missley MOI 0.1 -0.7 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -3.1 compare
nitrogen source no extra (N); with MOPS -0.4 -2.3 compare
phage P. putida PUT 7 MOI 1 -0.4 -1.5 compare
phage PUT8 MOI 0.1 -0.4 -2.3 compare
no stress control Growth with no stress -0.4 -1.6 compare
pH Growth at pH7 and (C) Trisodium citrate -0.3 -2.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.3 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.3 -2.4 compare
nitrogen source nitrogen source nitrite 0.5mM -0.3 -1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.3 -1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -1.8 compare
carbon source carbon source Glycerol 108.6 mM +0.3 +1.9 compare
carbon source carbon source 3-O-methyl-glucose 50 mM +0.3 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 +2.3 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM +0.4 +1.9 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM +0.4 +1.8 compare