Fitness data for PP_3270 in Pseudomonas putida KT2440

oxepin-CoA hydrolase/3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase
SEED: Phenylacetic acid degradation protein PaaN, ring-opening aldehyde dehydrogenase (EC 1.2.1.3)
KEGG: phenylacetic acid degradation protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source Phenylacetic (C) -6.2 -14.4 compare
carbon source Phenylacetic (C) -4.8 -13.5 compare
phage P. putida PUT 7 MOI 1 -0.5 -1.9 compare
carbon source acetate (C) -0.4 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4 -1.6 compare
stress R2A with Fusaric 240 ug/mL -0.4 -1.9 compare
carbon source ferulate (C); with MOPS -0.4 -1.7 compare
nitrogen source nitrate (N) -0.4 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.4 -1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X -0.4 -2.3 compare
r2a control R2A control -0.4 -2.7 compare
temperature shift Temperature shift 30_to_25; with MOPS -0.4 -1.9 compare
stress Growth with Chloride 200 mM -0.4 -1.6 compare
temperature Growth at 25C -0.4 -1.5 compare
carbon source ferulate (C); with MOPS -0.4 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +1.6 compare
carbon source 2,3-Butanediol (C) +0.4 +2.2 compare
nitrogen source D-2-Aminobutyric (N) +0.4 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +2.1 compare