Fitness data for PP_3263 in Pseudomonas putida KT2440

phospholipid modification enzyme
SEED: Inner membrane protein YbhQ

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
phage P. putida Sci small MOI 0.1 -0.6 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.5 -2.5 compare
no phage control Time6-nophage -0.5 -3.1 compare
pH Growth at pH6 and (C) D-Glucose -0.5 -2.4 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.4 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.4 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.4 -1.5 compare
carbon source Tween 20 (C) -0.4 -1.7 compare
nitrogen source Urea (N) -0.4 -1.7 compare
stress R2A with Fusaric 480 ug/mL -0.4 -2.2 compare
stress Growth with Chloride 500 mM; with MOPS +0.4 +2.2 compare
carbon source Valerolactam 10 mM (C) +0.4 +2.4 compare
carbon source carbon source 3-O-methyl-glucose 10 mM +0.4 +1.7 compare
temperature shift Temperature shift 30_to_21; with MOPS +0.4 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.8 compare
carbon source 4-Aminobutyric 10 mM (C) +0.4 +2.5 compare
nitrogen source NAG (N); with MOPS +0.4 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +1.9 compare
carbon source L-Lysine (C) +0.5 +2.5 compare