Fitness data for PP_3254 in Pseudomonas putida KT2440

putative Nucleosidase
SEED: 5'-methylthioadenosine nucleosidase (EC 3.2.2.16) / S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)
KEGG: S-adenosylhomocysteine/5'-methylthioadenosine nucleosidase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
phage P. putida Sci small MOI 0.1 -1.9 -2.9 compare
phage P. putida PUT 7 MOI 1 -1.4 -2.4 compare
pH Growth at pH6 and (C) Trisodium citrate -1.0 -1.9 compare
r2a control with 0.2% methanol R2A control with 0.2% methanol -0.7 -3.0 compare
carbon source D-Lysine 10 mM (C) -0.7 -2.3 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.6 -1.5 compare
nitrogen source Hydantoin (N) -0.6 -2.5 compare
pH Growth at pH6 and (C) D-Glucose -0.6 -1.6 compare
pH Growth at pH7 and (C) D-Glucose -0.6 -1.3 compare
pH Valerolactone (C) pH 6.5 +0.6 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6 +2.0 compare
carbon source Myristic (C) +0.6 +2.2 compare
pH Growth at pH9 and (C) Trisodium citrate +0.6 +1.7 compare
carbon source Tween 20 (C) +0.6 +1.7 compare
carbon source butyrate (C) +0.7 +2.3 compare
carbon source 3-Methyl-2-Oxobutanoic Acid (C) +0.7 +2.8 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.8 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +1.7 compare