Fitness data for PP_3252 in Pseudomonas putida KT2440

Modification methylase, HemK family
SEED: HemK family modification methylase PA2179

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.3 -2.0 compare
phage P. putida Sci Big MOI 0.1 -0.3 -1.3 compare
carbon source L-Leucine (C) -0.3 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.3 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.3 compare
nitrogen source D-2-Aminobutyric (N) -0.3 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -1.7 compare
r2a control with 0.2% methanol R2A control with 0.2% methanol -0.3 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.3 -1.7 compare
carbon source Tween 20 (C) +0.3 +1.5 compare
temperature Growth at 25C; with MOPS +0.3 +1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.3 +1.5 compare
carbon source Nonanoic (C) +0.3 +1.9 compare
temperature shift Temperature shift 30_to_25 +0.3 +1.8 compare
nitrogen source NAG (N); with MOPS +0.3 +1.4 compare
temperature shift Temperature shift 30_to_10; with MOPS +0.3 +2.0 compare
pH Growth at pH6 and (C) Trisodium citrate +0.3 +1.9 compare
temperature shift Temperature shift 10_to_25; with MOPS +0.4 +1.8 compare
pH Growth at pH6 and (C) Trisodium citrate +0.4 +2.2 compare