Fitness data for PP_3251 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: FIG00955186: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
phage P. putida Missley MOI 0.1 -0.5 -2.0 compare
nitrogen source Propandiamine (N) -0.5 -2.3 compare
phage P. putida Sci Big MOI 0.1 -0.5 -1.9 compare
carbon source Trisodium citrate (C) -0.4 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.3 compare
stress Butanol 0.6 vol% -0.4 -2.0 compare
phage P. putida Sci small MOI 0.1 -0.3 -1.3 compare
pH Growth at pH7 and (C) D-Glucose -0.3 -1.5 compare
carbon source carbon source D-Glucose 55.5 mM -0.3 -1.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.3 -1.4 compare
micoeukaryotes C.elegans, mixed culture-2 -0.3 -1.4 compare
carbon source carbon source 4-vinylphenol 0.01 mM -0.3 -1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +1.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +2.3 compare
nitrogen source nitrate (N) +0.3 +2.0 compare
phage P. put South MOI 10 +0.4 +2.2 compare
carbon source D-Glucose (C) +0.5 +2.7 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.5 +2.5 compare