Fitness data for PP_3246 in Pseudomonas putida KT2440

Beta-carotene hydroxylase
SEED: Beta-carotene hydroxylase
KEGG: beta-carotene hydroxylase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
phage P. putida Sci small MOI 0.1 -0.7 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.4 -2.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.4 -2.4 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 -2.4 compare
nitrogen source Ammonium chloride (N); with MOPS -0.4 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.4 compare
nitrogen source NAG (N); with MOPS +0.4 +1.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.4 +1.6 compare
micoeukaryotes Tetrahymena sp., Mixed culture-1 +0.4 +2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.4 +1.5 compare
phage P. put South MOI 10 +0.4 +2.1 compare
pH pH 6 +0.4 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +2.9 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 +0.7 +2.8 compare
micoeukaryotes Dictyostellum sp.mixed culture-1 +1.0 +5.3 compare
nitrogen source Propandiamine (N) +1.1 +4.0 compare
micoeukaryotes Dictyostellum sp.mixed culture-2 +1.2 +6.5 compare
micoeukaryotes C.elegans, mixed culture-1 +1.5 +7.1 compare
micoeukaryotes C.elegans, mixed culture-2 +1.6 +6.6 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 +1.7 +7.9 compare