Fitness data for PP_3229 in Pseudomonas putida KT2440

putative Periplasmic aliphatic sulfonate-binding protein
SEED: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
KEGG: sulfonate/nitrate/taurine transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.6 -2.3 compare
nitrogen source nitrogen source nitrate 5mM -0.5 -2.6 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.8 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -1.9 compare
nitrogen source NAG (N); with MOPS -0.4 -1.3 compare
stress Growth with Chloride 500 mM; with MOPS -0.4 -2.3 compare
carbon source ferulate (C); with MOPS -0.4 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.4 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.6 compare
carbon source carbon source D-Glucose 55.5 mM -0.4 -1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.4 -1.4 compare
temperature shift Temperature shift 10_to_34; with MOPS -0.3 -2.2 compare
phage P. putida South MOI 10 -0.3 -1.7 compare
phage PUT8 MOI 0.1 -0.3 -1.7 compare
phage P. putida South MOI 10 +0.3 +2.1 compare
carbon source 2-Keto-D-gluconic hemicalcium salt (C) +0.4 +2.2 compare
phage P. putida PUT 7 MOI 1 +0.4 +1.8 compare
phage P. putida Missley MOI 0.1 +0.5 +2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.5 +2.9 compare