Fitness data for PP_3216 in Pseudomonas putida KT2440

putative cysteine dioxygenase
SEED: Cysteine dioxygenase (EC 1.13.11.20)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.3 -4.1 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.1 -4.5 compare
pH Growth at pH6 and (C) Trisodium citrate -1.1 -2.9 compare
pH Growth at pH6 and (C) D-Glucose -0.9 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.8 -2.3 compare
phage P. put South MOI 1 -0.8 -3.1 compare
temperature shift Temperature shift 30_to_25; with MOPS -0.7 -2.5 compare
nitrogen source 2,6-diaminopimelic (N) -0.7 -1.3 compare
pH Growth at pH7 and (C) D-Glucose -0.7 -1.9 compare
carbon source 3-Hydroxydecanoic (C) -0.7 -2.5 compare
pH Growth at pH6 and (C) D-Glucose -0.7 -1.9 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.7 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.6 -1.6 compare
carbon source ferulate (C); with MOPS -0.6 -1.6 compare
carbon source L-Lysine (C) -0.6 -1.7 compare
temperature shift Temperature shift 10_to_34; with MOPS -0.6 -1.7 compare
carbon source 4-Hydroxyvalerate (C) (40mM) +0.7 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.1 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM +0.8 +1.9 compare
carbon source carbon source Bisabolene 48.9 mM +0.9 +3.3 compare