Fitness data for PP_3196 in Pseudomonas putida KT2440

Nodulation protein d1
SEED: Transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.7 -2.4 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 -0.5 -2.1 compare
pH pH 7 -0.5 -2.1 compare
carbon source carbon source D-Glucose 55.5 mM -0.5 -1.7 compare
phage moi 100 Time6-phageFRS -0.4 -2.3 compare
stress R2A with Fusaric 120 ug/mL -0.4 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.6 compare
stress MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL -0.4 -1.9 compare
pH Valerolactone (C) pH 6.5 -0.4 -1.2 compare
nitrogen source Ammonium chloride and TNT (N) +0.4 +2.3 compare
pH Growth at pH6 and (C) Trisodium citrate +0.4 +1.5 compare
pH Growth at pH7 and (C) Trisodium citrate +0.4 +1.8 compare
nitrogen source Urea (N) +0.4 +1.7 compare
temperature Growth at 25C +0.4 +1.8 compare
pH Growth at pH6 and (C) Trisodium citrate +0.5 +2.2 compare
nitrogen source 2,6-diaminopimelic (N) +0.5 +2.2 compare
phage P. put South MOI 10 +0.5 +1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.6 +2.3 compare
pH Growth at pH8 and (C) Trisodium citrate +0.6 +3.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.2 compare