Fitness data for PP_3191 in Pseudomonas putida KT2440

putative threonine ammonia-lyase / dehydratase
SEED: Threonine dehydratase, catabolic (EC 4.3.1.19)
KEGG: threonine dehydratase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
carbon source carbon source 3-O-methyl-glucose 50 mM -1.2 -2.4 compare
carbon source Myristic (C) -1.1 -1.6 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM -1.0 -2.0 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM -1.0 -3.2 compare
stress Growth with Chloride 500 mM; with MOPS -1.0 -2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.8 -2.3 compare
pH pH 8 -0.8 -2.6 compare
pH pH 7 -0.8 -1.9 compare
no stress control Growth with no stress -0.8 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.8 -2.3 compare
pH pH 4 -0.8 -2.2 compare
temperature Growth at 30C -0.8 -2.1 compare
carbon source butyrate (C) -0.7 -2.9 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.7 -1.5 compare
carbon source L-Arginine (C) -0.7 -3.7 compare
carbon source D-Glucose (C) -0.7 -1.6 compare
nitrogen source D-2-Aminobutyric (N) -0.7 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.8 +2.0 compare
phage P. putida PUT 7 MOI 1 +0.9 +1.9 compare
phage P. putida Sci small MOI 0.1 +1.3 +2.3 compare