Fitness data for PP_3190 in Pseudomonas putida KT2440

Ornithine cyclodeaminase/mu-crystallin family protein
SEED: Ornithine cyclodeaminase (EC 4.3.1.12)
KEGG: ornithine cyclodeaminase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
phage P. putida Sci small MOI 0.1 -2.0 -1.4 compare
nitrogen source no extra (N); with MOPS -1.9 -3.3 compare
temperature shift Temperature shift 30_to_21; with MOPS -1.9 -1.9 compare
pH pH 9 -1.5 -2.3 compare
carbon source butyrate (C) -1.3 -2.3 compare
stress 2-Ethylhexanol 0.4 vol% -1.2 -3.3 compare
carbon source carbon source 4-vinylphenol 0.01 mM -1.2 -2.0 compare
carbon source 2-methyl-1-butanol (C) -1.2 -3.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.2 -2.8 compare
phage PUT 8 MOI 1 -1.1 -1.1 compare
carbon source butyrate (C) -1.1 -2.5 compare
mixed community Putida_ML5X with Paraburkholderia sabiae T6SS mutant -1.0 -1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -1.0 -3.6 compare
reactor 40hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO. -1.0 -2.5 compare
carbon source Crotonic (C) -1.0 -1.9 compare
nitrogen source Ammonium chloride (N) +1.0 +2.8 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml +1.1 +2.2 compare
nitrogen source Ammonium chloride and TNT (N) +1.1 +2.5 compare
nitrogen source NAG (N); with MOPS +1.2 +2.6 compare
pH Valerolactone (C) pH 6.5 +1.3 +2.3 compare