Fitness data for PP_3189 in Pseudomonas putida KT2440

cytosine deaminase / isoguanine deaminase
SEED: Cytosine deaminase (EC 3.5.4.1)
KEGG: cytosine deaminase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
nitrogen source Cytosine (N) -1.4 -5.9 compare
nitrogen source 3-aminobutyric (N) -1.2 -7.3 compare
nitrogen source 3-aminobutyric (N) -1.1 -6.3 compare
nitrogen source Cytosine (N) -1.0 -5.2 compare
nitrogen source D-2-Aminobutyric (N) -1.0 -3.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7 -2.9 compare
carbon source 3-Hydroxydecanoic (C) -0.7 -2.4 compare
stress R2A with Fusaric 480 ug/mL -0.6 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.6 -1.9 compare
stress Growth with Chloride 500 mM; with MOPS -0.6 -2.3 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.6 -2.8 compare
stress NaCl stress 250 mM -0.6 -2.2 compare
pH Growth at pH6 and (C) Trisodium citrate -0.6 -1.8 compare
phage P. putida Sci small MOI 0.1 -0.5 -1.0 compare
nitrogen source NAG (N); with MOPS -0.5 -1.7 compare
carbon source ferulate (C); with MOPS -0.5 -1.6 compare
pH Valerolactone (C) pH 6.5 -0.5 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.5 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days +0.6 +1.3 compare
nitrogen source 2,6-diaminopimelic (N) +0.7 +2.4 compare