Fitness data for PP_3186 in Pseudomonas putida KT2440

putative Transcriptional activator
SEED: Thiaminase II (EC 3.5.99.2)
KEGG: thiaminase (transcriptional activator TenA)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
pH Growth at pH7 and (C) D-Glucose -2.0 -4.0 compare
carbon source L-Leucine (C) -1.4 -4.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.9 -1.8 compare
pH Growth at pH7 and (C) D-Glucose -0.8 -2.1 compare
temperature Growth at 30C; with MOPS -0.8 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.7 -2.2 compare
no stress control Growth with no stress -0.7 -1.9 compare
temperature shift Temperature shift 30_to_10; with MOPS -0.7 -2.1 compare
phage P. putida Sci small MOI 0.1 -0.7 -1.3 compare
temperature shift Temperature shift 30_to_21; with MOPS -0.7 -1.6 compare
stress Growth with Chloride 200 mM; with MOPS -0.6 -1.7 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -2.9 compare
nitrogen source nitrogen source Ammonium chloride 20mM +0.6 +2.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.6 +2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs +0.6 +2.0 compare
r2a control with 0.2% methanol R2A control with 0.2% methanol +0.6 +2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.7 +2.5 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml +0.7 +3.7 compare
phage P. putida South MOI 10 +0.8 +2.9 compare
nitrogen source NAG (N); with MOPS +0.8 +3.1 compare