Fitness data for PP_3182 in Pseudomonas putida KT2440

GGDEF domain protein
SEED: Sensory box/GGDEF family protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.1 -3.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.7 -2.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.6 -2.5 compare
nitrogen source NAG (N); with MOPS -0.6 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -2.8 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.6 -1.8 compare
pH Growth at pH8 and (C) Trisodium citrate -0.6 -2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.5 -2.7 compare
carbon source carbon source D-Glucose 55.5 mM -0.5 -2.5 compare
temperature Growth at 25C -0.5 -1.8 compare
pH Valerolactone (C) pH 6.5 -0.5 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.5 -2.8 compare
carbon source carbon source 3-O-methyl-glucose 50 mM -0.5 -2.1 compare
temperature shift Temperature shift 30_to_21; with MOPS -0.4 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.4 compare
nitrogen source D-2-Aminobutyric (N) -0.4 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -2.0 compare
temperature Growth at 34C -0.4 -2.4 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +1.5 compare
phage P. put South MOI 10 +0.4 +2.2 compare