Fitness data for PP_3181 in Pseudomonas putida KT2440

Site-specific recombinase, phage integrase family
SEED: Cointegrate resolution protein S

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.7 -2.1 compare
carbon source Trisodium citrate (C) -0.7 -2.2 compare
pH Growth at pH6 and (C) D-Glucose -0.6 -1.5 compare
no stress control Growth with no stress -0.6 -2.4 compare
nitrogen source Propiolactam (N) -0.6 -2.2 compare
carbon source carbon source Bisabolol 45 mM -0.5 -2.0 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml -0.5 -2.4 compare
stress Growth with Chloride 500 mM; with MOPS -0.5 -2.0 compare
pH Growth at pH6 and (C) D-Glucose -0.5 -1.3 compare
nitrogen source Urea (N) -0.5 -1.2 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.5 +1.9 compare
carbon source 2,3-Butanediol (C) +0.5 +2.3 compare
carbon source Acetate Carbon Source (20mM) +0.5 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.5 +1.4 compare
carbon source 3-Hydroxydecanoic (C) +0.5 +1.3 compare
stress Cholinium glutamate 10 vol% +0.5 +2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.6 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +2.0 compare