Fitness data for PP_3175 in Pseudomonas putida KT2440

putative Dioxygenase, ferredoxin reductase component
SEED: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source carbon source D-Glucose 55.5 mM -1.1 -2.4 compare
pH Growth at pH7 and (C) Trisodium citrate -0.8 -1.8 compare
pH pH 5 -0.7 -1.7 compare
phage P. putida Sci small MOI 0.1 -0.7 -1.6 compare
phage P. putida PUT 7 MOI 1 -0.7 -1.9 compare
temperature shift Temperature shift 10_to_30; with MOPS -0.6 -2.1 compare
carbon source Valeric (C) -0.6 -2.0 compare
carbon source 1,3-Butandiol (C) -0.6 -2.5 compare
carbon source acetate (C) -0.6 -1.8 compare
pH pH 9 -0.6 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -2.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.6 +2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs +0.6 +2.6 compare
mixed community Putida_ML5X with Paraburkholderia sabiae T6SS mutant +0.6 +3.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.8 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. +0.7 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.8 +2.8 compare