Fitness data for PP_3169 in Pseudomonas putida KT2440

conserved membrane protein of unknown function
SEED: putative YhfP protein
KEGG: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
phage P. putida Sci small MOI 0.1 -0.8 -1.8 compare
pH Growth at pH6 and (C) D-Glucose -0.8 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.6 -1.9 compare
carbon source carbon source 2-Deoxy-D-glucose 10 mM -0.5 -2.6 compare
carbon source Myristic (C) -0.5 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.5 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.5 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.5 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.5 -3.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.7 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -2.1 compare
phage P. putida PUT 7 MOI 1 -0.4 -1.2 compare
temperature Growth at 25C; with MOPS +0.4 +1.8 compare
stress Growth with Chloride 500 mM; with MOPS +0.4 +1.9 compare
temperature shift Temperature shift 30_to_25; with MOPS +0.4 +2.0 compare
nitrogen source Ammonium chloride (N) +0.5 +2.1 compare
carbon source D-Glucose (C) +0.5 +2.1 compare
stress R2A with Fusaric 120 ug/mL +0.5 +3.0 compare
temperature shift Temperature shift 30_to_25; with MOPS +0.6 +3.0 compare
pH Growth at pH7 and (C) D-Glucose +0.6 +1.8 compare