Fitness data for PP_3166 in Pseudomonas putida KT2440

catechol 1,2-dioxygenase
SEED: Catechol 1,2-dioxygenase (EC 1.13.11.1)
KEGG: catechol 1,2-dioxygenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source benzoic (C) -1.0 -5.6 compare
phage P. putida PUT 7 MOI 1 -0.7 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.5 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.5 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.5 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.7 compare
stress Growth with Chloride 200 mM; with MOPS -0.5 -1.7 compare
carbon source benzoic (C) -0.5 -2.9 compare
carbon source butyrate (C) -0.5 -2.4 compare
nitrogen source Urea (N) -0.4 -1.7 compare
stress NaCl stress 250 mM -0.4 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.2 compare
pH pH 4 +0.4 +2.5 compare
nitrogen source 2,6-diaminopimelic (N) +0.4 +1.8 compare
nitrogen source 2,6-diaminopimelic (N) +0.5 +1.9 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM +0.5 +2.4 compare
phage P. putida Sci small MOI 0.1 +0.6 +2.1 compare
phage P. putida Sci small MOI 0.1 +0.6 +2.2 compare