Fitness data for PP_3164 in Pseudomonas putida KT2440

1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase
SEED: 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase (EC 1.3.1.25)
KEGG: 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.3)


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group condition fitness t score  
carbon source benzoic (C) -7.9 -5.5 compare
carbon source benzoic (C) -7.8 -5.4 compare
phage P. putida Missley MOI 0.1 -5.8 -3.0 compare
carbon source benzoic (C) -3.8 -5.7 compare
pH Growth at pH6 and (C) D-Glucose -2.2 -1.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -1.9 -2.7 compare
carbon source D-Glucose (C) -1.9 -1.9 compare
temperature Growth at 30C; with MOPS -1.9 -1.1 compare
nitrogen source Urea (N); with MOPS -1.8 -1.7 compare
reactor 24hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO. -1.8 -2.4 compare
pH Growth at pH6 and (C) Trisodium citrate -1.8 -1.6 compare
temperature shift Temperature shift 10_to_34; with MOPS -1.6 -3.1 compare
nitrogen source NAG (N); with MOPS -1.6 -1.3 compare
temperature shift Temperature shift 30_to_21; with MOPS -1.6 -1.1 compare
carbon source 1,3-Butandiol (C) -1.6 -2.6 compare
temperature shift Temperature shift 30_to_34; with MOPS -1.5 -1.6 compare
pH Growth at pH9 and (C) Trisodium citrate -1.4 -3.1 compare
nitrogen source Urea (N) -1.3 -1.6 compare
temperature shift Temperature shift 10_to_34; with MOPS -1.3 -2.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.3 +1.1 compare