Fitness data for PP_3163 in Pseudomonas putida KT2440

benzoate 1,2-dioxygenase electron transfer component
SEED: Benzoate 1,2-dioxygenase, ferredoxin reductase component
KEGG: benzoate 1,2-dioxygenase electron transfer component

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source benzoic (C) -3.7 -11.4 compare
carbon source benzoic (C) -3.5 -8.9 compare
carbon source Trisodium citrate (C) -0.9 -2.3 compare
carbon source acetate (C) -0.8 -2.4 compare
carbon source carbon source 3-O-methyl-glucose 50 mM -0.7 -2.5 compare
carbon source benzoic (C) -0.7 -4.1 compare
carbon source butyrate (C) -0.7 -2.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.7 -3.4 compare
temperature Growth at 25C -0.7 -1.8 compare
nitrogen source Hippuric (N) -0.6 -3.3 compare
nitrogen source 2,6-diaminopimelic (N) -0.6 -2.0 compare
pH pH 9 -0.6 -1.9 compare
carbon source carbon source D-Glucose 55.5 mM -0.6 -1.9 compare
carbon source ferulate (C); with MOPS -0.5 -1.6 compare
pH Growth at pH8 and (C) D-Glucose -0.5 -1.8 compare
nitrogen source Propandiamine (N) -0.5 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.5 +1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.5 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.6 compare