Fitness data for PP_3161 in Pseudomonas putida KT2440

benzoate 1,2-dioxygenase subunit alpha
SEED: Benzoate 1,2-dioxygenase alpha subunit (EC 1.14.12.10)
KEGG: benzoate 1,2-dioxygenase alpha subunit

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source benzoic (C) -2.9 -12.2 compare
carbon source benzoic (C) -2.8 -11.2 compare
carbon source benzoic (C) -0.7 -4.9 compare
nitrogen source Hippuric (N) -0.6 -3.8 compare
temperature shift Temperature shift 30_to_34; with MOPS -0.5 -2.7 compare
nitrogen source D-2-Aminobutyric (N) -0.5 -1.8 compare
carbon source acetate (C) -0.4 -1.9 compare
carbon source carbon source 3-O-methyl-glucose 10 mM -0.4 -2.2 compare
nitrogen source Hippuric (N) -0.4 -2.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.4 -1.9 compare
stress MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL -0.4 -2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.4 -2.2 compare
nitrogen source no extra (N); with MOPS -0.3 -2.1 compare
nitrogen source Ammonium chloride (N) -0.3 -1.5 compare
phage P. putida Missley MOI 0.1 -0.3 -1.2 compare
temperature shift Temperature shift 10_to_30; with MOPS -0.3 -1.7 compare
phage P. putida Sci small MOI 0.1 +0.3 +1.2 compare
phage P. putida Sci Big MOI 0.1 +0.4 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +2.4 compare